Company Info for isbscience.org | Icebreaker

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Company Info for isbscience.org | Icebreaker

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isbscience.org

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I received my B.A. in Chemistry from Reed College in 2001 and was mentored in tandem mass spectrometry-based proteomics by Ashley McCormack in Srinivasa Nagalla's lab at the Oregon Health and Science University (2001-2004). In 2004 I co-founded Proteome Software with Ashley and Mark Turner to produce quality proteomics software for small scientific labs. In particular, I lead designed and developed the industry standard "Scaffold" software suite for organizing and interpreting proteomics data. In 2014 I returned to academia to pursue a PhD under Michael MacCoss. Here my work was in developing data independent acquisition (DIA) methods to acquire and analyze human proteomes. As both an experimentalist and a computational biologist, my long-term goal is to develop a holistic research program as a tenure-track faculty member. My current research focuses on making and validating peptide and protein detections with tandem mass spectrometry and statistically assessing the quality of quantitative proteomics data. I have also developed algorithms for phosphorylation site assignment and blind post translational modification (PTM) identification using de novo sequencing approaches. Much of my work explores the use of Bayesian probabilistic reasoning and non-parametric statistical analysis in mass spectrometry.

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Computer Science graduate from the University of California, Berkeley. Currently a full-stack software engineer at Stripe on Issuing. I am hardworking and always up for a challenge - once, I ran 12 half-marathons within the course of one year as a New Years Resolution. Feel free to contact me via my LinkedIn.

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I'm a front-end and full-stack JavaScript developer with an extensive background in biopharmaceutical research. As a science and design enthusiast, I marry logic and creativity to craft both performant and dynamic web applications. With a proven track record in problem-solving and teamwork, along with analytical skills honed by years of scientific training, I'm a quick study that can jump into any situation and make an immediate impact. A borderline OCD personality and a QA-like mindset also means that I have a strong propensity for doing things right the first time. As an avid consumer of anime, video games, and tabletop RPGs, I fit seamlessly into any nerd culture. While this web development journey has already been full with excitement and new experiences, I can't wait to see what else lies ahead!

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A detail-oriented, hard worker who enjoys problem-solving and collaborating in teams. Skills include: ■ Languages: C#, TypeScript, Python, Ruby, JavaScript, BASH, SQL, Kotlin, Java, CSS ■ Tools: Git, Azure, Docker, Kubernetes, Buildkite, Gradle, gRPC, Jupyter Notebooks ■ Frameworks: .NET Core, Entity Framework, REST, Angular, React.js, Protobuf, GraphQL, Temporal ■ Organizational: Agile development, Git, UNIX Environments

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Professionally curious. I make things.

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Investor at Twelve Below | ex-Komodo Health

Dr. Eugene Kolker (Gene)

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I enable companies to bridge AI, data, analytics, product, and customer needs and deliver measurable business results and practical ROI, without increased costs.

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Resident Physician

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Software Engineer